DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)0.2849115
Normalized Enrichment Score (NES)1.4439138
Nominal p-value0.052493438
FDR q-value0.144295
FWER p-Value0.746
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cd274962.2270.0267Yes
2Cdkn1a1921.6250.0400Yes
3Ifit32481.4490.0592Yes
4Pim12621.4250.0883Yes
5Slamf73091.2650.1055Yes
6Irf13721.1110.1154Yes
7Tnfaip23871.0860.1365Yes
8Zbp13911.0780.1601Yes
9Ifitm24650.9520.1636Yes
10Nfkb14860.9180.1795Yes
11Upp14920.9080.1988Yes
12Trim255160.8820.2131Yes
13Irf75480.8470.2246Yes
14Ifnar25670.8300.2390Yes
15Parp125710.8280.2570Yes
16Oasl16630.7010.2504Yes
17Hif1a6840.6830.2609Yes
18Serping17300.6450.2643Yes
19Lcp28400.5700.2503Yes
20Cd748490.5670.2612Yes
21Znfx18510.5660.2737Yes
22B2m8600.5630.2845Yes
23Casp89200.5200.2817Yes
24Nfkbia9540.5020.2849Yes
25Sri1116-0.5250.2570No
26Ogfr1770-0.6420.1100No
27Ifi271778-0.6440.1229No
28Ly6e1857-0.6630.1186No
29Auts21865-0.6650.1319No
30Pla2g4a1905-0.6740.1376No
31Il151933-0.6810.1463No
32Rnf2132130-0.7240.1142No
33Fas2311-0.7640.0870No
34Tnfsf102592-0.8450.0369No
35Epsti12646-0.8600.0433No
36Txnip2924-0.947-0.0037No
37Tap13068-1.004-0.0164No
38Rapgef63087-1.0120.0021No
39Lgals3bp3172-1.0490.0051No
40Casp43233-1.0840.0148No
41Ncoa33306-1.1130.0222No
42Mthfd23458-1.1910.0118No
43Nod13491-1.2050.0312No
44Isg203663-1.3480.0194No
45St3gal53960-1.876-0.0113No
46Oas23963-1.8960.0312No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE